Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNVIDALRKRRAVKRFDPAFQLSENDKKQLLQEVLANAPSAFNLQHWRPVIVEDAELRQKIRAIAWDQPQVTESSLLIVLCAKVNTWEVDAKRVWDGASPEVQDIMVGAIDQYYRDRPQTQRDEVMRSAGIFAQTLMLLAQEHGLDSCPMDGFDF--DAMAKLINLPEDHVVCLMIAVGKSASEPYLRVGKLPYDDVIIQNTF 5HDJ Chain:B ((2-187)) NSVIETILNHRSIRKYED-KPLSEEQIQTIV-ESAQAASTSSYIQAYSIIGVKDKETKRKLAQLAGNQPYVETNGHFFVFCADFHRHDVI--AEMEKKD----------LSTALE--STEQFMVAIIDVALAAQNATLAAESMGLGACYIGGLRNELEEVSKLLKLPHHVIPLFGLTVGHPAGI-TDKKPRLPFKHVYHEETY

General information: TITO was launched using: RESULT: Template: 5HDJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 799 -79475 -99.47 -431.93 target 2D structure prediction score : 0.68 Monomeric hydrophicity matching model chain B : 0.74 3D Compatibility (PKB) : -99.47 2D Compatibility (Sec. Struct. Predict.) : 0.68 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.563

(partial model without unconserved sides chains): PDB file : Tito_5HDJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5HDJ-query.scw PDB file : Tito_Scwrl_5HDJ.pdb: