Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTSVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSSLGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFLTPSEQYSFISSTLIREIARLKGDVTKFVPQAVVEAFERKHQQGW
3X1K Chain:D ((4-158))-----VLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFK---


General information:
TITO was launched using:
RESULT:

Template: 3X1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 730 -115370 -158.04 -744.32
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain D : 0.91

3D Compatibility (PKB) : -158.04
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_3X1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3X1K-query.scw
PDB file : Tito_Scwrl_3X1K.pdb: