Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVLRVLVTTTALLAAGAAMADEAVVHDSYAFDKNQLIPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWTDDVSVNGTKYDLDMDNNNVYLNAEIRPWGASTNPWAQGLYIAAGAAYLDNDYDLAKRIGNGDTLSIDGKNYQQAVPGQEGGVRGKMSYKNDIAPYLGFGFAPKI-S-----------KNWGVFGEVGAYYTGNPKVELTQYNLASVTGNPTSAQDAVDKEANEIRNDNKYEWMPVGKVGVNFYW
2N2M Chain:A ((77-134))----------------------------------------------------------------------------------------------------------------------------------------------------------------PVFRINEYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDAS-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2N2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 88 1658 18.84 36.04
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 18.84
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.279

(partial model without unconserved sides chains):
PDB file : Tito_2N2M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2N2M-query.scw
PDB file : Tito_Scwrl_2N2M.pdb: