Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKRTPISFEFFPPKTDASAEKLRIVHQELQHLNPEFFSITYGAGGSTRERTLAAIEDFNGK-GTPVAPHLSCIGDDKTRIAELLDLYKAQGIDRIVALRGDLPSGQVGLGELPYAQDLVRFIREHSGDHFHIEVAAYPEMHPQAESLDSDIQRFIEKVQAGANAGITQFFFNPDSYFYFIERLEKAGINIPVAPGIMPITNASNLIRFADGTGAEIPRWIRKQLQAYGDDSESIKAFGHEVVVKLCERLIAGGAPSLHFYSMNQVEPTRQLVVDLGLN
3FSU Chain:E ((25-292))------VSFQFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTY---------THSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPP------EM-YASDLVTLLKEVA--DFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV-


General information:
TITO was launched using:
RESULT:

Template: 3FSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1260 -51443 -40.83 -203.33
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain E : 0.80

3D Compatibility (PKB) : -40.83
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.691

(partial model without unconserved sides chains):
PDB file : Tito_3FSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FSU-query.scw
PDB file : Tito_Scwrl_3FSU.pdb: