Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAHLFFTGACAAAAVLPTSDREEVSPVWSIYDDYCCSASQNAEVNDPQVEGGGVGNCGGTALPRLPLISGPVPSMTLKGAQLKKEAPIRRGAQGAVYSALDVATSAPAEDENAKGLFSQEACRGHDGEEQVADGGQRPARRGRRVAVKRIFIQASDFGARDISATVLREVTLHRFVSEKQAACLAAAGTSYSTASASDATARAEDDQGQALCNLIDDSARVIHLYRVVEAPHKEMCLVMELAAT-NLEQVVFPHGARGAQRGDGAGGYMRKPGVVSLFGSSASIGVGGGLGLSSASLSTAPDAATADAGPQASPPSPPPSRMPLVRYVMRRLLRLVCFLHETCRVVHRDLKLSNVLVSKDA---GLRLGDFGSARFIPPLRSATKTGCENSPSVLKPPAAPAGQREHLLCTPPSIRTTLHYRPPEALLGDQVCRTAADVWALGVIFAQLLLQKGLFRSESELDLLGGIQKLLGMPTYSAPPSWLGAPPVPGPPRDRESAAHIPAPQASLPYKFHAGVVPADGLDLLSRMLHQQPECRITAREALQHPFLNLEGLSALATHDDDERGRVLWEERVATVLREQATGPIYGMGRGERRPMLISLADNEDEEDQEDDEDGAAPFCVDLGGCTSY
2BDW Chain:A ((8-276))----------------------------------------------------------------------------KFSDNYDVKEELGKGAFSVVRRCVHKT-------------------------------------TGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQH----------------------------------------PNIVRLHDSIQEE-SFHYLVFDLVTGGELFEDIVARE---------------------------------------------------------------FYSEADASHCIQQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---------------------------W--HGFAGTPGYLSPEVLKKD-PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---------------------------PS---PE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2BDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1254 -62867 -50.13 -238.13
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -50.13
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_2BDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BDW-query.scw
PDB file : Tito_Scwrl_2BDW.pdb: