Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAYTVEQGIVAPLDRANVDTDLIIPK----------QFLKS--I---------KR----TGFGDNLFDELRYLDEG--YPGQD-----NSVRPKNPDFVLNQPRYQGATVLIARTNFGCGSSREHAPWALNEYGFRTVIAPSFADIFFNNCFKNGMLPVILPED-IVDQLFKECAAQEGYQLTIDLAAQ-------EVRTPTGEAFKFE---VDPFRKHCLLNGLDDIGLTLQNADAIRAYEEKTKQVRPWVFQEIN
2B3Y Chain:B ((661-877))-----IVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQAPQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADAL--GLT--GQERYTIIIPENLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGG--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2B3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 947 11697 12.35 67.22
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : 12.35
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_2B3Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B3Y-query.scw
PDB file : Tito_Scwrl_2B3Y.pdb: