Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSFLLQATIFLGASLILVPLGKRLGIATVLGYLFTGILLGPSVLNIAHDPEAIMELAEFGVILLMFLIGLELRPQRLWEMRDSIFVMGSLQVVITGIILMLTVLLLFQQHLAASFVIGFALALSSTAFVLQLLTEKQQLNTTYGQQSFSILLFQDIAAIPLLAVITLLAGTESTHHGIAYFAAIIATFTGLFLFSRYVMRPFFRFVAKSGATELITAVGLFIILAVVLLMDTLGISTTLGAFLTGVLLADSEFRHELEASIAPFKGLLLGLFFMTVGMTTQLSLLIEMPWLIIGGAIGLLVIKTLVLTAIARYKKYSWNNSLLLGTCLAQGGEFAFVILSLAKSEKILTDALLEPVTLIVTLSMVLTPVIYWIMACKIIPLFHKELPPEYDEIPQQDNPIIIAGFGRFGQIIARIARLQHLGFTAIDNNLHQVDFVRRYGGKLYYGDVTQPDLLRSAGIEKAKVFILAIDDVEDSMNVARHLRLNYPNLKLLARARDRHHVHLLRDLGVEHIWRETYLSSLGMAYCALRELGISD---EQAYNNIEIF-RDYDEKLLIQQQSIYTDEQKVFETHRNALAELEHLFESDAQQASSKHDVNLKRHLQPNRIDITRDHEE
5NC8 Chain:A ((28-190))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSVIIAGYGRFGQVVGRLLSAQGYHLSILDHSPSQIDML----NKVFYGDAARKDLLEAAGAKDAQLLVIAIDAPDKALEIVELAHKHYPQLKIVARAIDRRHAYQYLRLGVTSFKRETFDSAVNLGIEALTLLGNSSTVAERAGDLFSQHDNASLHELAAL----W-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5NC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 642 -105116 -163.73 -678.16
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -163.73
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_5NC8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NC8-query.scw
PDB file : Tito_Scwrl_5NC8.pdb: