Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHYTGIDQLINSFDQALRSLVPGATAAQRQNPAETVEAKLGVEDARHVAGLMRVNHSGEVCAQALYHGQALTAKLP---NVRREMQQAAIEEQDHLAWCEDRLKELNSHTSLLNPI-WYGLSYGMGALAGIAGDKYSLGFVAETERQVSLHLQDHLNQLPA-QDERSRKILEQMNEDELHHRHTALEAGGVELPYAVKITMTAISKLMTKTSYYL
5I4J Chain:D ((15-163))---------------------------------------LLDRSVTAPVTEGFNVVLASFQALYLQYQKHHFVVEGSEFYSLHEFFNESYNQVQDHIHEIGERLDGLGGVPVATFSKLAELTCFEQ-ESEGVYSSRQMVENDLAAEQAIIGVIRRQAAQAESLGDRGTRYLYEKILLKTEERAYHLSHF---------------------------


General information:
TITO was launched using:
RESULT:

Template: 5I4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 573 -87 -0.15 -0.60
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain D : 0.57

3D Compatibility (PKB) : -0.15
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_5I4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I4J-query.scw
PDB file : Tito_Scwrl_5I4J.pdb: