Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHLHILGICGTFMGSLALLARDLGHKVTGSDSNVYPPMSTQLENAGIELMQGYDRSHLQPHPDLVIVGNAMKRGIDAVEYMLNEGLPYISGPQFLADHVLQGKHVLGVAGTHGKTTTTTMLAWVLDQAGLNPGFLIGGVPLGFSESARLGGGKYFVVEADEYDSAFFDKRSKFVHYHPKTAILNNLEFDHADIF-DDLAAIQKQFHHLVRTIPSEGRIIAPITETHIDEVLEMGCWTPVIRTSLEANEKAALSAELISIDGSH--FKVLENGNVIGEVKWSMTGQHSVANALATIAAAQHVGVSLEKACEALSNFGGVKRRMELLGTVNGIEVYDDFAHHPTAIDTTLDGARKRLGERRLWAIIEPRSNTMRMGSHKDGLAHSARLADEVIWYQPEGLDWDLQPVIEAATNHAQVSRSLDEIIDRIVNEAGEGDAVVIMSNGGFGGLHQKLMSALKAKAA
5VVW Chain:H ((13-312))----FVGIGGAGMCGIAEVLLNLGYEVSGSDLKA-SAVTERLEKFGAQIFIGHQAENAD-GADVLVVSSAINRANPEVASALERRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQLGASRYLVAEADESDASFL-------HLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQ-IARPTVTYGL--SEDADVRAINIRQEGMRTWFTVLRPEREPLDVSVNMPGLHNVLNSLATIVIATDEGISDEAIVQGLSGFQG-----------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5VVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 1664 -127520 -76.63 -429.36
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain H : 0.71

3D Compatibility (PKB) : -76.63
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_5VVW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5VVW-query.scw
PDB file : Tito_Scwrl_5VVW.pdb: