Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTFTLFFGVP-SGCSFGSIVALEWSGLPYQLCRIEMP-AQCNTEEYRQINPVGETPALLYDNGKVLTESMAILNHIMAKSLNA------AFHYEQGTEQFNLFNQKLAFLNTTLFNAFSPHWYSLEHSSSEGNKQALREYGAVQVKKAFTALENSLTNQTWLM-GDQLSFVDGYYAGIARWLKYHNVIDIDQFPNCKRLYEQLQNE-AAVKFAHAIEQE
3F6D Chain:A ((1-205))----MDFYYLPGSAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNPQHCIPTLVDEDGFVLWESRAIQIYLVEKYGAHDADLAERLYPS-DPRRRAVVHQRLFFDVAVLYQRFAEYYYPQIAG---QKVPVGDPGRLRSMEQALEFLNTFLEGEQYVAGGDDPTIADLSILATIATYEVAGY-DLRRYENVQRWYERTSAIVPGADKN------


General information:
TITO was launched using:
RESULT:

Template: 3F6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 916 -25973 -28.35 -133.19
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -28.35
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_3F6D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F6D-query.scw
PDB file : Tito_Scwrl_3F6D.pdb: