Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTLSMNYLQDARQHVLQQIRTACELAQREPETVQLLAVSKTHPSERLR-EMYAAGQRAFGENYLQEALDKIDALQDLDIEWHFIGH-VQRNKTKHLA---EKFDWVHGVDRLIIAERLSNQRGDDQAALNICLQVNIDGQESKDGCAPE-DVAELVAQMSQLPKIKLRGLMVIPAPDNT--G----------AFADAKKLFDAVKVQHAHPEDWDTLSMGMSSDLEAAIA-AGSTMVRVGTALFGARDYSQKG
4V15 Chain:A ((31-261))---LDLPAFEANLRAMQAWAD---------RHEVALRPHAKAHKCPEIALRQLALGARGICCQKVSEALPFVAA-GI-R-DIHISNEVVGPAKLALLGQLARAAKISVCVDNAENLAQLSAAMTRAGAEIDVLVEVDVGQ--GRCGVSDDATVLALAQQARALPGLNFAGLQAYHGSVQHYRTREERAAVCRQAARIAASYAQLLRESG--I-ACDTITGGGTGSVEFDAASGVYTELQAGSYAFMDSDYG---


General information:
TITO was launched using:
RESULT:

Template: 4V15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1042 4362 4.19 20.57
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 4.19
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_4V15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V15-query.scw
PDB file : Tito_Scwrl_4V15.pdb: