Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWNPNSIIFCFYFIFSILALWGIIEAWVHQSRTETIHPFKAFVHLLAFYLSYLLIPLWFFNLYAGWIGYYSIHETIFIFLLSGILIYARFIEPHMVRVDVHQYRLNPDRHFVKPVKVALIADLHIGLFSG-------HERQLKIIVKKLNEQQPDLVVVAGDWTYEPEDK---LVQELSVLK------------------------DIKAPVYSVPGNHDEQYPGPPIQQLLKDALYYNDVM-DI----EGKI-----VEF--D--EFRLIGIGDLWAG-------KTDMRSMPDL--PQDKPWLILSHNPDTVDM-------VPKLPNRPLMLSGHTHGGQVELPLVTNYIMKKVSILGHKRGFYSHEHADVFVTVGTGMVGIPLRFRVPPTIDIIELA
4FBW Chain:A ((10-254))--------------------------------------------------------------------------------------------------------------NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELELLSNINYLDPNINVAIPVFSIHGNHDD-----RYS--ALDILQVTGLVNYFGRVP---NIVVSPILLQKGFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFVLWGHEHECLIDG-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 756 -11356 -15.02 -70.53
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -15.02
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_4FBW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FBW-query.scw
PDB file : Tito_Scwrl_4FBW.pdb: