Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----TQKCIITIRKADPALGQDTLYDLVSLAPNSDLTFGKIPASMTEVTFG-VDEKCQARLVRGDLSRPYEYKGMQNPLYGLDGPDFVKKLQAWRRKPE-NSINFSLW---------
1UFX Chain:A ((1-103))GSSGSSGTLVRVKKSAATLG-------IAIEGGAN--TRQPLPRIVTIQRGGSAHNC-GQLKVGHVIL--EVNGL--TLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNSGPSSG


General information:
TITO was launched using:
RESULT:

Template: 1UFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 326 22241 68.22 252.73
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 68.22
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_1UFX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UFX-query.scw
PDB file : Tito_Scwrl_1UFX.pdb: