Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAIQPLFTELEPMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVP-ALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQPAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCD-QIRQNVARIECYVSGNNADALQPVLQNMIPQELTWTLHNLS
2OHO Chain:B ((10-266))-----------------MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIG---------RPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAWEEVKAAL--DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAP--SIQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLV-G-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQ--KAVEHR-FFTTANPEIFQEIASIWLKQKI--------


General information:
TITO was launched using:
RESULT:

Template: 2OHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1373 -129522 -94.33 -528.66
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -94.33
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.647

(partial model without unconserved sides chains):
PDB file : Tito_2OHO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OHO-query.scw
PDB file : Tito_Scwrl_2OHO.pdb: