Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIAALHQPSQVQLNQDGNLKHFLTIEGLSKENLTKILDTAQSFLDDNNNLINRPLLEGRTVMNLFFENSTRTRTTFEAAAKRLSANVLNIDIARSSTSKGETLRDTLWNLEAMAADIFVVRHSSSGAAHFIAKDVCPKVAIINAGDGRHAHPTQAMLDMLTIRREMKKPFEDLSVAIIGDIKHSRVARSDVAALQTLGCKDIRVIAPNTLLPVGFSEY----GDHVRLFNNMDEGITGCDVIIALRIQNERIDSPALSSQSEFYRMYG---LNKERLSLAKPDCIVMHPGPMNRGVEIDSSIADGEQSVILKQVTNGIAVRMAVLALSMQGQLQEQGLIDAIAL
5G1P Chain:E ((13-308))--------------------QHILSVQQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVLSFSEATSSVQKGESLADSVQTMSCY-ADVVVLRHPQPGAVELAAKH-C-RRPVINAGDGVGEHPTQALLDIFTIREELGT-VNGMTITMVGDLKHGRTVHS-LACLLTQYRVSLRYVAPPS-MPPTVRAFVASRGTKQEEFESIEEALPDTDVLYMTRIQKER-----FG----YEACFGQFILTPHIMTRAKKKMVVMHPMP--RVNEISVE--SDPRAAYFRQAENGMYIRMALLA------------------


General information:
TITO was launched using:
RESULT:

Template: 5G1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1420 -123213 -86.77 -438.48
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain E : 0.76

3D Compatibility (PKB) : -86.77
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_5G1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G1P-query.scw
PDB file : Tito_Scwrl_5G1P.pdb: