Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGSTITPWVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLTPAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQAFAQSK
4G1K Chain:B ((30-270))---------VIGNWKMHG-RLSGNQAL--LTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGG--RVSWGSQDVS-AHEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQLDAVLAVLSPDE-AARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLA--AKGAGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGASLKSGDFLAICRA-----


General information:
TITO was launched using:
RESULT:

Template: 4G1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1306 -159023 -121.76 -659.84
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -121.76
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_4G1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G1K-query.scw
PDB file : Tito_Scwrl_4G1K.pdb: