Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALISMRQLLDHAAEHNYGVPAFNVNNLEQMRAIMLAADATNSPVIVQASAGARKYAGAPFLRHLILAAIEEWPHIPVVMHQDHGTSPDVCQRSIQLGFSSVMMDGSLGADGKTPTTYDYNVDVTRQVVAMAHACGVSVEGEIGCLGSLETGMAGEEDGVGAEGVLDHSQLLTSAEEAKQFVADTNVDALAIAVGTSHGAYKFTRPPTGDILAIDRIKEIHVALPNTHLVMHGSSSVPQEWLKVINEFGGNIGDTYGVPVEQLVEAIKHGVRKINIDTDLRLASTGAIRRFMAENPAEFDPRKYFAKTVDSMKQICIDRYEAFGTAGNADKIRPISLEKMVDRYK
2FJK Chain:A ((1-305))-MLVTGLEILRKARAEGYGVGAFNTNNMEFTQAILEAAEEMKSPVILALSEGAMKYGG-RALTRMVVALAQE-ARVPVAVHLDHGSSYESVLKALREGFTSVMIDKSH-------EDFETNVRETKRVVEAAHAVGVTVEAELGRLAGI-------EEHVAV---DEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGR---PFIDHPRLARIAKL-VPAPLVLHGASAVPQELVERFRAAGGEIGEASGIHPEDIKKAISLGIAKINTDTDLRLAFTALVRETLGKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA----------------


General information:
TITO was launched using:
RESULT:

Template: 2FJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1814 -159445 -87.90 -522.77
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -87.90
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_2FJK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FJK-query.scw
PDB file : Tito_Scwrl_2FJK.pdb: