Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPQQIELVKSTVPVLREHGVTLTTYFYKRMLNNNPELKNVFNLDDQTSLRQPRALAAAVLAYAENIENPTVLAKAVERITTKHVSLDIQPDQYAIVGDNLLHSISEVLNVPFESELIEAWKQAYLQLADILIGVEKQKYEQLESLKGGWAGWRSFEITQID-PLESGKRFTLKATDHG----DVLTSPANAFISVKVQVPN--QQLEQPKAFKFTEAQEDNTYLFDVQPE------ENHTEFSVSNILLEHYRVGDQVQVSAPLTL
4G1V Chain:A ((2-259))LAEKTRSIIKATVPVLEQQGTVITRTFYKNMLTEHTELLNIFNRTNQKVGAQPNALATTVLAAAKNIDDLSVLMDHVKQIGHKHRALQIKPEHYPIVGEYLLKAIKEVLGDAATPEIINAWGEAYQAIADIFITVEKKMYEE-----ALWPGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSASTKNGLRFAVKMEAARENFPAGL---VSEYLHKDAKVGDEIKLSAPAG-


General information:
TITO was launched using:
RESULT:

Template: 4G1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 960 -44987 -46.86 -183.62
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -46.86
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_4G1V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G1V-query.scw
PDB file : Tito_Scwrl_4G1V.pdb: