Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHPIVIIGSGMAGYTLAREFRKLNPEQELVMICADDAVNYAKPTLSNAFAGKKAPEQIPLGDAAKMSAQLNMRIEPFTWVKEILAERHELVLEKDGIISQQPYSKLILAVGANPIRLAIAGDGSDDIHVVNSLIDYRSFRENLAQRKDKRVVILGAGLIGCEFANDLLHSEYDVTVIDLAPQPLGRLLPSHIASAFQQNLEEAGVKFTLGTTVEKVSKINNGEDYAVTLANGQTLVADIVLSAIGLQPNISLAQSANIQTSRGVITNSLLETNQADIYAIGDCAEVNGT-----LLPYVMPIMQQARALAKTLSGQQTNVHYPAMPV-AVKTPAAPLTVLPAPVDVDVNWETEEFD-DGMLAKAIDNEGTLRGFVLLGATAGKQRLTLTKLVPDLIPAQA
4EMJ Chain:A ((2-370))ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILA-EADWYGEARIDMLTGPEVTALDVQTRTISLDDG---TTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTS--ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACDRGVIVDHCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVSA--PQLPVSWTEIAGHRMQMAGDIEGPGD-FVSRGMPGSGAALLFRLQERRIQAVVAVDAP--------------------


General information:
TITO was launched using:
RESULT:

Template: 4EMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2159 -237517 -110.01 -656.12
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -110.01
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_4EMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EMJ-query.scw
PDB file : Tito_Scwrl_4EMJ.pdb: