Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDV-PEADFKYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIPFVA-DEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGPQVESHKRFPERINAGFMQVIDDKHVRLRVFERCVGETLACGTGACAAAVSGMRRGLLANSVEVELAGGKLQIEWQEG-DVVWMTGPTTHVYDGRLDLRYFQG
2GKE Chain:A ((1-274))--MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGF-DQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEK-NYILRTD-IQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL-----


General information:
TITO was launched using:
RESULT:

Template: 2GKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1745 -74431 -42.65 -274.65
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -42.65
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_2GKE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GKE-query.scw
PDB file : Tito_Scwrl_2GKE.pdb: