Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEE-IGRRMREEGLRITGVTTSNATKEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSSKLVDKLGKFPLPVEVIPYGSQQLLHIFEEKRFQPVLRTDENGEVLTTDGGHYIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKGVEILDAIRRK 3KWM Chain:D ((12-204)) ------LKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVNYRDKIK----TVVSSSEDSTRKLKALGFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTLGNFPLPIEVIPMARSYIARQIVKLGGQPVYR-----EQTITDNGNVILDVYNLKIDNPLKLETELNQITGVVTNGIF------------------------

General information: TITO was launched using: RESULT: Template: 3KWM.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1073 16840 15.69 87.71 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain D : 0.74 3D Compatibility (PKB) : 15.69 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.429

(partial model without unconserved sides chains): PDB file : Tito_3KWM.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3KWM-query.scw PDB file : Tito_Scwrl_3KWM.pdb: