Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEKGVETMKIAVDAMGGDHAPQAIVEGVALAQQDFPEVEFLLYGKEAEIKKYLTNEKNITIIHTDEKINSDDEPVKAIRRKKTASMVLAAQAVKNGEADAVFSAG-NTGALLAAG------LFIVGRIKNIERPGLMSTLPVVGKEGAGFDML------DLGANAENKPEHLLQYGILGSFYARKVRGIGRPRVALLN----NGTEATKGSE---VTKKAYELLQNETSL-NFIGNVEARELLN----GVADVVVT-DGFTGNAVLKSIEGTAMNMMNLLKSAILNEGIKGKMGAMLLKDGLRSLKAEMDYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHTMLETDVVGQLVEQFEKSEE
2HI1 Chain:B ((103-279))-------------------------------------------------------------------------------------CVKRATELALRGDVQAIATAPLNKEALHLAGHNYPGHTELLATLTHSRD-YAM-VLYTDKL--KVIHVSTHIALRKFL--DTLSTARVETVIGIADTFLKR-VGYVKPRIAVAGVNPHAG---LFGDEETRILTPAITDARAK--GMDVYGPCPPDTVFLQAYEGQYDMVVAMYHDQGHIPLKLL-------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 475 4907 10.33 33.38
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : 10.33
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_2HI1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HI1-query.scw
PDB file : Tito_Scwrl_2HI1.pdb: