Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MRKPLFYATITKTFEHKKGGKDVYLSSEYLKQFDKDLYYKILLLESFEDQAWHTAAQLAQVVQLDARSVSKYLNELSKN-YQQFSGKTHPLFTKNHRSGYNFYDTLDSIEHERFLIYLVQSTLKFQLLHDIFFEEFHTMYQFAQKHYISESTAHRKINEWKQQLQTYGIRLQRGTYIAQGEEEIIRLYLHMTF-WQLFRGKIWPFETISQMDVKNMAEHIMAFFNVRLNEIKKRRLEYMLGAFFLRKSQKHYVVLNEKKRRLISDNLLFQRFCQVMEPVFPNYFQVEDELGALFLVLMTREEYYSDPKIRKKIFDFHQQAKTPPFTALSEAKAALSLYQEEQGLPAENLTFEAENYLFSSHFFAYLFPNAKETIDGNSSDFINHLVIENKELK----------QWLV--HFFESRHKHPNHLAFKNHAFLM--GRYLTVFKTLGAFTPQLPKITILLMTDFPLFEEQLLE--EGLRTFFRNEYQLIFLPTDYRGREVDLLISTSKVHRKPWADLDYFIVTEELKLIDYIQLSQKFEMIQKQKLLKQ 5LRT Chain:A ((1-500)) MHRVMGIETE----------------------------YGISVPHQPNANAMAASSQVVNAYAPIGAPAQGLANVILTNGARLYVDHAHPEYS-----------------------TPEVTNPRDAVLWDKAGERIMAEAARRAADLPMGWTIQLYKNNTDNKGASYGCHENYLMNRSTPFADIVRHLIPFFVTRQVFCG-------AGRVGIGADGRGEGFQLSQRADFFEVEVG---------LETTLKRPIINTRDEPH-ADPEKYRRLHVIIGDANMSEIATYLKLGTTALVLAMIEDGFLSQ-------DFSVESPVGALRAVSHDPTLRYQLRLHDG---RRLTAVQLQMEYLEQARKYVEDRFGTDVDDMTRDVLDRWETTLVRLADDPMQLSRDLDWVAKLSILEGYRQREN-LPWSAHKLQLVDLQYHDVRPDRGLYNRLVARGRMNLLVDEAAVRTAMHEPPNDTRAYFRGRCLAKFGAEIAAASWDSVIFDLPGRDSLQRVPTLEPLRGTRAHVGDLLDRCRSATELVAALT---

General information: TITO was launched using: RESULT: Template: 5LRT.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2603 34417 13.22 77.17 target 2D structure prediction score : 0.42 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : 13.22 2D Compatibility (Sec. Struct. Predict.) : 0.42 1D Compatibility (Hydrophobicity) : 0.63 QMean score : ?

(partial model without unconserved sides chains): PDB file : Tito_5LRT.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5LRT-query.scw PDB file : Tito_Scwrl_5LRT.pdb: