Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIISEFDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEVEEMMNP-ERIAVAAVDQDELVGFIGAIPQYG----------ITGWELHPLVVESSRRKNQIGTRLVNYLEKEVAS-RGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLPNANGWDKPDIWMAKTIIPRPNSQ
4R3L Chain:A ((13-167))-TLRNAR---MDDIDQIIKINRLTLPENY---PYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVS-------------------------NYPAIALYEKLNFKKVKVLKGYYADGEDAYLMARPL-------


General information:
TITO was launched using:
RESULT:

Template: 4R3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 613 -25918 -42.28 -181.24
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -42.28
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_4R3L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R3L-query.scw
PDB file : Tito_Scwrl_4R3L.pdb: