Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKKDAKIYVAGHRGMVGSAIVRELNRQGYNNIITRT---H------------------KELDLCRQDQVEEFFAEEKPDYVFLAAAKVGGIVANQSALADFMYDNMILEMNVIHSAWKNG-CKKLQFLGSSCIYPRMAPQ----------------PMPESCLLTSELEKTNEAYALAKISGLKYCEFLNKQYGTDYISVMPTNLYGPNDNYHPTHSHVLPALIRRFHEAKEAG-LPTVTCWGDGSPLREFLYVDDFANLCVFLMNNY--SGDETVNAGTGK--ELSIKELTEIVAKIIGYEGEILWDTSKPNGTPRKLLDVSKA-TKLGWTYKTELEDGIRLSYEDFLNNPMRAER
1ORR Chain:B ((2-339))-----AKLLITGGCGFLGSNLASFALSQGID-LIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTS-IDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ----LDF-HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-DQGWVGWFCQKAVEIK-NGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI------


General information:
TITO was launched using:
RESULT:

Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1592 -45700 -28.71 -155.44
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -28.71
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_1ORR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ORR-query.scw
PDB file : Tito_Scwrl_1ORR.pdb: