Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-KITVC--QVELWGAD-STK--PSDTAWVSPGGIARFTVKFGR-----HSLFLYAKTSGDCTPSPVLEGPSRWGTHTIKGSLQEKQKGTVLIQEVSMKEATRGHP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1G0D Chain:A ((6-684))GLIVDVNGRSHENNLAHRTREIDRERLIVRRGQPFSITLQCSDSLPPKHHLELVLHL-GK-RDEVVIKVQKEHGARDKWWFNQQGAQDEILLTLHSPANAVIGHYRLAVLVMSPDGHIVERADKISFHMLFNPWCRDDMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFEDYVMDICFEVLDNSPAALKNSEMDIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTDGVAPYRWTGSVPILQQWSKAGVRPVKYGQCWVFAAVACTVLRCLGIPTRPITNFASAHDVDGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQELSDGEFCCGPCPVAAIKEGNLGVKYDAPFVFAEVNADTIYWIVQKDGQRRKITEDHASVGKNISTKSVYGNHREDVTLHYKYPEGSQKEREVYKKAGRRVTRLQLSIKHAQPVFGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHYDDYVRCVSEHHLIRVKALLDAPGPIMTVANIPLSTPELLVQVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLLVDFDSDRLKDVKGVTTVVVHKK


General information:
TITO was launched using:
RESULT:

Template: 1G0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 295 841 2.85 9.14
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 2.85
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_1G0D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1G0D-query.scw
PDB file : Tito_Scwrl_1G0D.pdb: