Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMECDVKPVRLAILGLGTVGGGALKLLQENAAEIKRRTGREIQITHVGTRRPRPDLE--LEGIKQSADLLDIVRQPDVDVVVEVMGG----IHPAYEIIMEAIKHGKQVVTANKALLAKHGNELFKAAEDNAVQIAYEAAVAGGIPIIKVIREGLAANHIEWLAGIINGTGNFILTEMREKGRAFDDVLKEAQELGYAEADPTFDVEGIDAAHKLTILASCAFGIPLQFDKVYTEGISKITAQDVKYAEELGFRIKHLGIARRAEKGIELRVHPTLIPDEQLIANVNGVKNAVLVQANAVGPTLYYGAGAGAGPTASAVVADVIDIVRDISYTEDGAGTIPQLAFEALTNMPILSREEMTTGYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDALAQIQALPAIRGEIVRIRLESLDS
4YDR Chain:A ((1-303))-------MKLLLFGYGNVGKAFRKLLHEKRSPE----LNDVIIGGIVTRRGIMLQDKEDFTPDLEGDVFKAFEKIKPDIIVDVSSANYNNGEPSLSLYKEAIKDGVNIITTNKAPLALAFNEIFSLARSKGVKIGFQGTVMSGTPSINLYRV-LPGSRVIKIRGILNGTTNFILTLMNK-GVSFEEALKEAQRRGYAEEDPTLDINGFDAAAKITILANFMIGNSVTIKDVKFEGINRDL--------PKNEKIKLIAYADE----KEVWVKPLPISQDDPLYNVDGVENALEITTDI-QSILIRGPGAGPVNAAYGALSDLILLKRDC------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1711 -1795 -1.05 -6.04
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -1.05
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_4YDR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YDR-query.scw
PDB file : Tito_Scwrl_4YDR.pdb: