Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQFQLRRRKQMELVLPNNYVVIDEEEMMYLDGGAYLSKRACQGICVALAMSPGIFIALAGAAVLTKKLINYIKVGGLGGWL---IGAAAGVLATAAGKIAYCIGYGALNRGCDISGNPYPWDGFISATVR
3S1L Chain:C ((223-265))------------------------------------------------------------------------------AAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLP----------


General information:
TITO was launched using:
RESULT:

Template: 3S1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 105 -1644 -15.66 -41.10
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain C : 0.58

3D Compatibility (PKB) : -15.66
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.018

(partial model without unconserved sides chains):
PDB file : Tito_3S1L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S1L-query.scw
PDB file : Tito_Scwrl_3S1L.pdb: