Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVATIAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEAISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSK-PWQTLWRDMIKIDSKALGMEKEGDELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGLVFPESLKEFES----EDSFAKEISAEEANKINDADVIITYGDD----KTLEALQKDPLLGKINAIKNGAVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
3EIW Chain:A ((5-296))------------------------------------ASTISVKDENGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKK-------KRIIKPVREKIGDYTSVGTR-KQPNLEEISKLKPDLIIADSSR-HKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFDR----NQKVLPAVVA---KAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRD--VW-ARSRGLISSEEMAKELVELSKKEQK---


General information:
TITO was launched using:
RESULT:

Template: 3EIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1574 -2649 -1.68 -9.36
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -1.68
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_3EIW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EIW-query.scw
PDB file : Tito_Scwrl_3EIW.pdb: