Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREKMRFPTLVFDIETLTDLKAGAHLYHLDLPEADVEQALTKIRRQESGMDFQRLPLHEIVCISGLWIDESG---F--RLFS----------FSREHYSEAEILQKFLSIFDKRHP-TLVSWNGSQFDLPVILFRAMYHGLSAPGLFDQGELDS----Q-----KRFNN-YQNRYH---HRHIDLMDVMAM-FNGRNFQKLDDVACILGLPGKRGESGYHVPEYVRTE--QWLKLTSYCEGDVLNTWFIYLRWLLLKGQMNVDEHNHWISSSIEYLQTMPQQADFLEVWQRTSKHTEFTSHYFNPLNF
3IAY Chain:A ((246-469))---TAPLRIMSFDIECAGRI-----------------------------GVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFTLNTCSPITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRETKNVNIDGRLQLDLLQFIQREYKLRS-YTLNAVSAHFLGEQ------SIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALV---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3IAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 745 -26911 -36.12 -144.68
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -36.12
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.348

(partial model without unconserved sides chains):
PDB file : Tito_3IAY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IAY-query.scw
PDB file : Tito_Scwrl_3IAY.pdb: