Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITHSLKDKVVLITGGAKNLGGLISRKFAEQGAKLAIHYNSSETQADAEQTLADVKALGADAILIQADLTDIDNIEKLFLDTKQHFGGIDIAINTVGKVLKKPILETTEQEFDSMSDINSKIAYFFIQSAGRHLNNGGKICSIVTSLLAAYT-GFYSTYEGLKAPVEHYTRTASKEFGDRQISVTAVAPGPMDTPFF-------------YGQESAEAVAYHKSASALGGLTKIEDIEPLVRFLVT-DGWWITGQTIFANGGYTTR
3QWF Chain:D ((16-268))-----LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTK--DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWP--QDVANVVGFLVSKEGEWVNGKVLTLDGG----


General information:
TITO was launched using:
RESULT:

Template: 3QWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1329 -59235 -44.57 -248.88
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.78

3D Compatibility (PKB) : -44.57
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_3QWF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QWF-query.scw
PDB file : Tito_Scwrl_3QWF.pdb: