Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYSLMSVTEKETSNSLYRQWQILSRLPTGKWIGTRELQEMLEREGIE-ISLRTIQRDLNQIAQRFPIESNKAVPQGWRWQSDAPIQSLPHMTSSQAVTFMMVEEHLKRLLPPSLLDEMGPWFDLAKRSL-----STQNNVRQWINRVRIVPASQPLIPPVVDRAAQQAIYEGL--------LQDKQIECVYRARVNQGEDKTYILNPLALVQKG--------AVIYLICTRHDKTEVQTFALHRFKSAKVLES-RALHPVNFDIDHYI--------------------DSGALG--------------FRVDYNQPTESIQL---TLTMTEQTAKTFYESQLSKDQTITPIEENIVEVTATVPFTSQLVWWLRSFGKKLLHIEPVQVHNAVREIEPDSK--
5IWZ Chain:A ((4-397))---------MPVRPDLQQLEKCIDDALRKN--DFKPLLALLQIDICEDVKIKCSKQFLRKLDDLICRELNK----KDIQTVSSILISIGRCSKN---IFILGQAGLQTMIKQGLVQKMVSWFENSKEIILNQDEAVMNMIEDLFDLLMVIYDISDEGKNQVLESFIPQICALVIDSRVNFCIQQEALKKMNLMLDRINQEMLTLMSNMGERILDVGDYELQVGIVEALCRMTTEKRRQELAYEWFSMDFIANAFKEIKDCEFETDCRIFLNLVNGILGDKRRVYTFPCLSAFLGKYELQIPSDEKLEEFWIDFNLGSHTLSFYIEAVTVPEEKVQMYNIEVRESKKLLTLTLKNIVKISK--KEGKELLFYFD---------ESLEITNVTKKVFGGLEHH


General information:
TITO was launched using:
RESULT:

Template: 5IWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1385 -8380 -6.05 -27.03
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -6.05
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.230

(partial model without unconserved sides chains):
PDB file : Tito_5IWZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IWZ-query.scw
PDB file : Tito_Scwrl_5IWZ.pdb: