Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLYATQDEKKQAAAKAALKH----LPKGGILGVGTGSTVNFLIDLLPELQ--LEAAVASSQATADRLKKLGIEVVDMNHVVSLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYRE-----GVVTDNGNVILDVFNLNILNAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ
3UW1 Chain:A ((7-235))--LLMTQDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAAVKDRYRGAVSSSVATTERLKSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFVCIADASKRVAMLG-QFPLPVEVVPMARTAIGRRLAALGGVPVLRVKQDGTPYVTDNGNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTEHGVETLR--


General information:
TITO was launched using:
RESULT:

Template: 3UW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1235 428 0.35 1.96
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : 0.35
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_3UW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UW1-query.scw
PDB file : Tito_Scwrl_3UW1.pdb: