Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIDWQKEVEARKEDLLEDLKNLLRVNSERDDSKVTPDAPFGPGPRDALKHMLAYGERDGFKVKNV---DNYAGHI-DL-G-EGDETLGIFGHMDVVPAGD---GWD----TDPYEPVIKDGKIFARGSSDDKGPSMAAYYAMKIIKELDLKLSKKVRFVVGSDEESG-----WGDMAYYFEH---------EEEPDFGFSPDAEFP-IINGEKGNVSLALRFKGDNAGDYVLKSFVSGLRENMVPGTATAALQVPSADAAIAMEEAFYQFIEANPVSGTIEADNTYVKIELVGKG-AHGA------SPQSGINAGSFLALFLDNYEFLGSAKQFIHVAAAYVHEDFYGEKLGVAYEDEKMGKLTMNAGLFAFEE----NGTEEANFINMNFRFPKGVTVDGLQSDIEQTVGQEGATVTR-GARVMEPHYVPMDDPLVATLLQVYEDHTGEKGYEQ---IIGGGTYGRLLK----RGVAYGAMFPGYTDTMHQANEFMSLDDLFRATAIYADAIYRLAK
5K8P Chain:C ((7-422))-VAKVMKTLDGMREGLIQTAVELGSIEAPTGR------------EGAAGDYVYEWMARNGFGPERVGVFDDRFNVVGRLRGTGGGASLSFNSHLDTIMAREDTARFADANDRIYHEAWHEEGRIYGYSVVNCKGPMACWLIAAKALKEAGAALKGDVVLTAVCGEIDCEPVDEFQGHDYLAEDIGARYAISHGAISDYALVAEATNFKPAWV---------------------------------------------------------------------EAGKVFLKVTVFAGPSRYTPYVPRPVAALDSPNAIVRMAKLVEALEEW------ADNYEK----RYT------REYGGGTVVPKVAIGAIRGGVPYKIYAFPELCSIYMDIRLNPDTNPLVVQREVEAVVSKLGLKAEVKPFLFRRGYEAQGIEPLQNALEVAHREVVGRPTERPGSPECSMWRDTNPYNELGIPSLTYGCGG-----GAGGGNTYFLVDDMLKAAKVYAMTAMDLCN


General information:
TITO was launched using:
RESULT:

Template: 5K8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1901 13887 7.31 37.63
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : 7.31
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_5K8P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K8P-query.scw
PDB file : Tito_Scwrl_5K8P.pdb: