Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISMKVVFHIDELEKWSETGKNVKNLIKASPE-----TTIVVSVNGIAI----------TGYLDSANAEFLDLQGVVFHACANAMRANHISESSLPEQVI---------VVPAGVLDLVELQSQGYAYIKP
2D1P Chain:A ((11-140))-GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAALRRGVVDETEAGRLGLASSNLQQGFTLSGLGALAEASLTCDRVVQF


General information:
TITO was launched using:
RESULT:

Template: 2D1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 431 -26411 -61.28 -249.16
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -61.28
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_2D1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D1P-query.scw
PDB file : Tito_Scwrl_2D1P.pdb: