Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAIAGAGAMGSRIGLMLHQSGNEVLLIDRWPAHIEAIRTNGLIADFNGKEVVAKLPIYSPEEIIESNEHVDLIVALTKANQLDDMFCSIQSIITDNTYVLCLLNGLGHEDVLEKYVPKKNILFGITMWTAGLAGPGKVTLLGDGEIELENLEPEGEAFTKKVVEVFQEANLNPIYSHNVRYSIWRKACVNGTLNGLCTILDCNIAELGAQKAAESMVRTIVSEFASIAAKEGIILDQEEVYQHIASTYDPDNIGLHYPSMYQDLIKNHRLTEIDYINGAIWRKGQKYDIATPYCAFLTQLVHAKEGILGAE
3HWR Chain:B ((20-316))MKVAIMGAGAVGCYYGGMLARAGHEVILIARPQ-HVQAIEATGLRLETQSFDEQVKVS-A--SSDPSAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLEQ-EVAAAVVYVATEMAGPGHVRHHGRGELVIEPTS----HGAN-LAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPDD-VALAIRRI--AETMPRQSSSTAQDLAR-GKRSEIDHLNGLIVRRGDALGIPVPANRVLHALVRLIEDKQQ--


General information:
TITO was launched using:
RESULT:

Template: 3HWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1655 -221746 -133.99 -746.62
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -133.99
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_3HWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HWR-query.scw
PDB file : Tito_Scwrl_3HWR.pdb: