Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEKILVEHLVKKYGDNTVLNDINVSINEGDVVCIIGPSGSGKSTFLRCLNRLEEPSDGEIIIDGAHLMDKSTD--INLVRQHIGMVFQHFNLFPHLSILENIILAPMDLKKE---SREEAEKKAIKLLQTVGLEDK-KDMYPEMLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVGDVLNVMKKLAEQ-GMTMVIVTHEMGFAKEVANRVMFIDDGNFLEDGTPQQIFENPQNERTKDFLNKVLNI
1L2T Chain:A ((20-221))------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVEL-PLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDG------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 946 722 0.76 3.70
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : 0.76
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_1L2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L2T-query.scw
PDB file : Tito_Scwrl_1L2T.pdb: