Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVMQLLPEL--NSGGVERGTLEIARALVAQGHQSLVVSNGGR--LVSQLE-AEGSTHLTLPIHKKSLSSLWQIRPLRQLIEEHQPDIVHVRSRVPAWLTHFALRKIPANKHPHLISTVHGFYSVN--------RYSAIMTQAEKVIAVSDSVVKYITDHYKNCPPQDIVRIYRGIDPAAFPHNYQPSAQWFNQVFNDFPELENKFLLCLPGRITRLKGHESLIELMQKLGEQYPQLHAVVVGGADVKKQTYLSELQNTIQSKGLADKITFVGHR--SDIREWLAFSDIVLSLSNQ------AETFGRTALEALSVGTPVIGWNRGGVAEILSHVYPQGLVEAENEKALVERVKHHIEQPQTVA---------PVTMFSLKDMCDQTLELYQSVLK
3OKA Chain:A ((5-380))RKTLVVTNDFPPRIGGIQSYLRDFIATQDPES--IVVFASTQNAEEAHAYDKTLDYEVIRWPRSV-MLPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQ---AGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFG-S-HPTFEHLPSGVDVKRFTPATPED---KSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRY-----ESTLRRLATD--VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEP-


General information:
TITO was launched using:
RESULT:

Template: 3OKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1838 21881 11.90 63.24
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 11.90
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3OKA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OKA-query.scw
PDB file : Tito_Scwrl_3OKA.pdb: