Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------MTIMFVRKRN----------------------SALFTVILLGSILSGCQVVNVKQQ--ALNVTIANERNSILTQGKLSEASLNVLSMSGQEAKACTDSPDTCVNQLK-------NLPQILDE---QLLSAASEMYL----AKAMALSDSSECKISRF-----------------TKHKPTEEQKVIQNKYDECL----DQQLSLLDKSIRYSYAYLFSTKRQPTDRIF-DNRQVQIRDFYNQAIAKMVSVYDLRYPQ-------------------------------------KNVVEPQI------------------HIGKSVYSIDFEFHRQLSGQKLEKLISSYNLNFSGLRTINRRDGFGSEFVAVFPSSGKE--DINEYILDPLNYSYKN-GVNPNIHHARYLAATIVAEPKHAKTIQEIINDPEFVI-------RVYD--------------------------PYRTDNI------------NVAGKQYPLATNFSAPYGLWLAENNLGVAAYLSLIDRDQHLTMPHLYMLEPYNPN--------KKIIVLVHGLASSPEAWIALTNDVMG-DTVLRDNYQVWQVFYSTNMPILESRFQIYALLKQAFGSLNPSDPAAHDAVLVGHSMGGIISRLLVSDADITKPALEMMTIRQQNRFKKHPMVTERLQ-MHSISNFDRTIFLASPHRGTDYAD--RWFTLAARKIIRLPGAFLSAVTTSLTTENLDIKDFLNNIDNGLIQNGPSDL---SHQSKFMELTENINPHQGLIFHSIMG----NITKSDDPNVITDGIVPYKSAHLEGAKSEKVLPGGHSIQLTPQAVLEL-RRILREHLVEHGLYKP--
4ZUZ Chain:A ((8-864))DVIKFKEPERCDYLYVDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEHQLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKIERLQQIEKYIELIQVLKKQYDEQNDIRQLRTGGIPQLPSGVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPEDKTPTPINKKSLRDKVKSTVLSHYKDEDRIDGEKKDEKLNELITNLQNELVKELVKSDPQYSKLSLSKDPRGKEINYDYLVNSLMLVDNDSEIGDWIDTILDATVDSTVWAVQASSPFYQGAKEISSDRDADKISIRVQYLLAEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGADIEPIIYDYINSNHAELGLKSPLT-GKQQQEITDKFTKHYNTIKESPHFDEFFVADPDKKGNIFSHQGRISCHFLDFFTRQTKGKHPLGDLASHQEALQEGTSNRLHHKNEVVAQGYEKLDQFKKEVVKLLAENK--PKELLDYLVATSPTGVPNYSMLSKETQNYIAYNRNWPAIQKELEKATSIPESQKQDLSRLLSRDNLQHDNLSAITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGRE-----WWFAGSRNEARKTQCEELQRVSKEINTLLQSESLTKSQVLEKVLNSIETLDKIDRDISAESNWFQSTLQKEVRLFRDQLKDICQLDKYYFKS-TKLDEIISLEMEEQFQKIQDPAVQQIVRDLPSHCHNDEAIEFFKTLNPEEAAKVASYLSLEYREINKSTDKKTLLEQDIPRLFKEVNTQLLSKLKEEKAIDEQVHEKLSQLADKIAPEHFTRNNIIKWST


General information:
TITO was launched using:
RESULT:

Template: 4ZUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3147 200094 63.58 302.26
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 63.58
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.158

(partial model without unconserved sides chains):
PDB file : Tito_4ZUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZUZ-query.scw
PDB file : Tito_Scwrl_4ZUZ.pdb: