Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MRPGKKSSSNKSRVMKNKYAHRSWLGAVCLLGCSLSYA-------AEEQFNDALNAANSGNTALLDQYQLAMQ----NDVLGYYPEYWKLNTNLGFQSPTSIVSFAQRYP-QSAMAEKLAADYVE---------EKVKQADFASAQPILPYVSNPDQAENCALAQVRAKSGDALVFAEYKDVWLATESQPESCIGLGRMMLSSPLMSTQDKQ----QRLWVQLRAGL---SGQALATAQTLGLNLSLAQLNQIQANPLNYLWSAPKTNDVDYAYLIFALGRLANNDLGNAFANVQRVAQGTPESVQKYLYRTV----------AYIGGTTVMKNNFN-----REVLQYFDASYGYPLSPEEAEIYARQAIRFSAWESLIRAIDSMSVSQKQEDRWQYWLARATEQRGDSNSKNTAQCIYKKLAESGD------DYH----------NLLAKDRLGVRYNHQPYNDE-PTASDLRRLDQNIHFNRAFTLRRINVNPTYTNREWNWAVRQAYLQHDDG------LLLAAAKRAHDMGWYDRAIYAADRTTNKHNDTYRYVTPHKTNVVSHSYNAGIDP-----AWAYGLMRQESRFVTSARSHVGAGGLMQIMPDTAKLIARQMGETYNPAALSEMNTNIRYGTFYLSMIQGQLSNNPVLATAGYNAGPNRARR--WQPDYQPIEADQYTETIPLLE--------TRDYVKHVMTNATHYGVILGQGAQSLIQRMKVIPTRSSP-
4HNY Chain:A ((54-862))VDSLALKGLDLYSVGEKDDAASYVANAIRASPICCHVLGIYMRNTKEYKESIKWFTAALNNGSTNKQIYRDLATLQSQIGDFKNALVSRKKYWEAF--LGYRANWTSLAVAQDVNGERQQAINTLSQFEKLAEGKISDSEKYEHSECLMYKNDIMYKAASDNQDKLQNVLKHLNDIEPCVF----DKFGLLERKATIYMKLGQLKDASIVYRTLIKRNPDNFKYYKLLEVSLGIQGDNKLKKALYGKLEQFYPRCEPPKFIPLTFLQDKEELSKKLREYVLPQLERGVPATFSNVKPLYQRRKSKVSPLLEKIVLDYLSGLDPTQDPIPFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHT--PTLVEFYILKARILKHLGLMDTAAGILEEGRQLDLQDRFINCKTVKYFLRANNIDKAVEVASLFTKNDDSVNGIKDLHLVEASWFIVEQAEAYYRLYLDRKKKLDDLASQIANDIKENQWLVRKYKGLALKRFNAIPKFYKQFEDDQLDFHSYCMRKGTPRAYLEMLEWGKALYTKPMYVRAMKEASKLYFQMHDDRLKRKSDSLDENDVFGEKLIETSTPMEDFATEFYNNYSMQVREDERDYILDFEFNYRIGKLALCFASLNKFAKRFG----TTSGLFGSMAIVLLHATRPFDPILKKVVTKSLEKEYSEFDWLNFYQEKFGKNDINGLLFLYRYRDDVPIGSSNLKEMIISSLSP---LEPHSQNEILQYYLYPYDVPDY


General information:
TITO was launched using:
RESULT:

Template: 4HNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2759 84583 30.66 130.93
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 30.66
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.140

(partial model without unconserved sides chains):
PDB file : Tito_4HNY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HNY-query.scw
PDB file : Tito_Scwrl_4HNY.pdb: