Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNIYQFEAELLVGDIKQFADYKGKVLLIVNTASKCGFTP-QFAGLEKLYEKYKDLGLEVLGFPCNQFGGQDPGSNKEIGTFCQRNYGVKFPMFAKVDVKGPEAHVIFRYLTRE-------AKGILGSSTIKWNFTKFLVGKDGSVLNRYAPTTKPEALEADIEKALAS
5H5R Chain:A ((11-168))-RSMHEFSAKDIDGHMVNLDKYRGFVSIVTNVASQ-GKTEVNYTQLVDLHARYAERGLRILAFPSNQFGKQEPGSNEEIKEF-AAGYNVKFDMFSKIEVNGDDAHPLWKWMKIQPKGKGILGNAIKWN------FTKFLIDKNGVVVKRYGPMEEPLVIEKDLPHY---


General information:
TITO was launched using:
RESULT:

Template: 5H5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 746 6085 8.16 40.84
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 8.16
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_5H5R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H5R-query.scw
PDB file : Tito_Scwrl_5H5R.pdb: