Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLHPMWENYPALSKELTETLKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQL-----LFSQFGPEQDRDKAIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLLSDYSTSLKSLQLNSRSMEKVLNGE-------LGQMDDRY--NYELSVKEYLENISGKTAELFQLSCSVGAFESGT-SERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLPLIYSLQKNKPKLLPYLEKKAAMTEEDVDAVRKIVEHTGGVEEARKLAASYTEKALKEIKKLPATSLRTKENLFSLTQLILDRKD
3Q1O Chain:D ((43-251))----------------------------------LEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII--VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGK--------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 820 -19066 -23.25 -99.30
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain D : 0.68

3D Compatibility (PKB) : -23.25
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_3Q1O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q1O-query.scw
PDB file : Tito_Scwrl_3Q1O.pdb: