Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKKELFDALDDFSQQLLVTLADVEAIK---KNLKSLVEENTALR-LENSKLRERLGEVEADAPV-KAKHVRESVRRIYRDGFHVCNDFYGQRREQDEECMFCDELLYRE--
3U4Z Chain:A ((375-483))---TLLISEVLKTSKQYLSVLAQVVDIQSSDKNIRLKICDNSCNQELKVVIFPDLCYEWRDKFSINKWYYFNEFVRQIYNDEVQLKNNIHSSIKESDDQRKVITYNQEQGVF


General information:
TITO was launched using:
RESULT:

Template: 3U4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 450 8144 18.10 79.84
target 2D structure prediction score : 0.19
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 18.10
2D Compatibility (Sec. Struct. Predict.) : 0.19
1D Compatibility (Hydrophobicity) : 0.70
QMean score : -0.007

(partial model without unconserved sides chains):
PDB file : Tito_3U4Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U4Z-query.scw
PDB file : Tito_Scwrl_3U4Z.pdb: