Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSDALRIALVGNPNCGKTSLFNHLTGTRQKVANYAGVTVERKVGHFQLPSGRSVRVLDLPGAYSLNATSPDEAITRDVCLGKIAEEGQQDAFLCVVDATNLKLHLGLVLEMIELGRPILLVLNMMDEARRRGIQINTQKLSQRLGVPVVETVAVRNAGIENLLHALDQE-KYSVPQTELSGLTGTHHQKIDMIFKDVVHYVDQEDKRTDFLDRIFLHPVLGLLSLAIMMFIVFQAVFAWAAPFMDGIEGFFGWLGEVVGSVITQPLLHSLVVDGIIAGAGGVVVFLPQILILFFFILVLEESGYLPRAAFLLDKLMFQAGLSGRAFIPLLSSFACAVPGIMATRSISDPRDRFTTIMVAPLMTCSARLPVYALLIAAFIPEKMVWGIFNLQGLVLFGLYMAGIVSALCVSFLMKFFQKDKSQHALLLELPSYRFPDLKSVGIGLLDRAKIFLKRVGGIIFALSILLWFLCTFPQPPEGATLPAIDYSFAGMLGHLIQPLFAPVGFNWQICIALIPAMAAREVVVAALGTVYALSATDEDAVAQGLSHLISADGTGWSLATGLSLLVWFIYAPHCLATLATVRRETGSWKHVAAMTAYLFGLAYFASFVTYQIASHYWG
3W5J Chain:A ((5-168))-----RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILL-GADMVEIIDLPGIYDLHGFSDDEQVVRHFLHDNVP-----DLALVILNATQIERQMSLLLQLKQLNMNIVVLLNMSDEAKQYGITIDSRKMSELLQIPVFQLS----TGYQEALQAVTRALRYPTP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 743 -128962 -173.57 -811.08
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -173.57
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.681

(partial model without unconserved sides chains):
PDB file : Tito_3W5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W5J-query.scw
PDB file : Tito_Scwrl_3W5J.pdb: