Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRPITAVIHRQALQNNLAVVRKAMPN-SKVFAVVKANAYGHGIERVYEAFK--AADGFALLDLEEAKRIRALGWTGPILLLEGV---FSPQDLFDCVQYQLSFTIHSEAQIEWVEQHPYPAQ---FDVFLKMNSGMSRLGF-KPQHYVQAWERLNNLANVAKITHMMHFSDAD---GDRFGQQGIDYQITAFEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSLRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTARVQFINQV
3E5P Chain:B ((7-366))--RPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDPILILSVVDLAYVPL----LIQYDLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFK--AVLAVLEELPRYVHVSNSATALWHPD-VPGNMIRYGVAMYGLNPS-GNKLAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLR-HLQGFTVLVNGKRCEIVGRVCMDQCMIRLA--EEVPVGPVVTLVGKDGNEEN-TLQMVAEKLETIHYEVACTFSQRI------


General information:
TITO was launched using:
RESULT:

Template: 3E5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1895 -25293 -13.35 -72.89
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -13.35
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3E5P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E5P-query.scw
PDB file : Tito_Scwrl_3E5P.pdb: