Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQTLHVELGERRYPIFIGSQL--DPKQLLEPYIHGQQVMIVSNVTVAPLYLSHYQEALESLGKTVATCILPDGEKYKDIQHLNLIFDALLEAGFNRDCTVLALGGGVIGDMAGFASACFQRGVYFVQVPTTLLSQVDSSVGGKTGINHPLGKNMLGAFQQPQVVLADMAQLNTLPERELSAGLAEVIKYALLGDEDFLVWLEENMDGLVA-RDADLLAEAVYRSCAHKARIVANDEKEQGERALLNLGHTFGHAIESYLGYGTWLHGEAVATGMVMAADLSQRLGWISNEDVARTKKIIQRANLPISCPQIPLDDFLGHMAHDKKVLNGQLRLVLLKQLGQAVITKDFDVELMKQAILANQHG
1XAH Chain:B ((3-351))---LQTTYPSNNYPIYVEHGAIKYIGTYLNQ---FDQSFLLIDEYVNQYFANKFD------N--VHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYYH---KIPHGHAVMVGIIYQFIVANALF-DSKHDISHYIQYLIQLGYPLD-------TLYQYML--------GVQMVLMRQFGDIVVQ-HVDQLTLQHACEQLKT-


General information:
TITO was launched using:
RESULT:

Template: 1XAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1763 -51988 -29.49 -160.46
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -29.49
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_1XAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XAH-query.scw
PDB file : Tito_Scwrl_1XAH.pdb: