Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQNFVSRM-PEVTFWLDAPIELGMNR-ARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKRLDATQSPDQVFEQALQYLA
4HLC Chain:B ((4-196))-FITFEGPEGSGKTTVINEVY-HRLVKDYDVIMTREPGGVPTGEEIRKIVLEGN---DMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNS------DQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQ---


General information:
TITO was launched using:
RESULT:

Template: 4HLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 854 -13573 -15.89 -73.37
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -15.89
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_4HLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HLC-query.scw
PDB file : Tito_Scwrl_4HLC.pdb: