Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDFYSVNELAEQLGVTTRSIRNYLHEGKLKGTK--VGGQWKFSERNLFEFLYGDQAEEAAKEMQRFMLNAPITMRFNLQYRDFTAINQFREQLVQYHNDVYANKKDRLLQYDLYKDNHAEILIGGNFNYVVNFSQWINEKLLIQTDISLVS
5E01 Chain:B ((2-54))-AMTYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLL--------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5E01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 165 -10302 -62.44 -202.00
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -62.44
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.900

(partial model without unconserved sides chains):
PDB file : Tito_5E01.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5E01-query.scw
PDB file : Tito_Scwrl_5E01.pdb: