Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIRFEEKVSTENAQFVCQWSNSLGKSFQEQWMGPRIPFLLTLQALEGVFSIFDEQEFVGFIQKIRLEDSNLHIGRFFINPQKQEQGLGSQALRKFVSLAFENEDIDSISLNVFEANQRAQNLYQKEGFEIVQMVEAPVRKYSILKLE
4PV6 Chain:O ((12-139))----TIREFSPKDIESVYRIAQTSLT---EYYTQALIL-DLHREWPESFMVYTVAGSVVGFIVGSKYSRTEARILLFAVDERFRRMGVGSALMDAFLSLC-REQNMLSVRLEVRTDNDEAIRFYKKYGFVITAMLPN-----------


General information:
TITO was launched using:
RESULT:

Template: 4PV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 518 -83299 -160.81 -650.77
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain O : 0.70

3D Compatibility (PKB) : -160.81
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_4PV6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PV6-query.scw
PDB file : Tito_Scwrl_4PV6.pdb: