Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGLYLITNDDPIQ--LLLEKLDAALATRQIAILQYRRKKIDKAEQPAEVEQIKQLCEKYQIPFVINDDLKLAAQFG-LGVHLGQSDGEITDAKSQLPEGVIIGRTCLNSLELAQKAI--ADGATYVAFGAVYATATKPEA--GNVGIEVIKQAAAQ------YDLPICAIGGLTVENSKPVIEA--------GADLCAVISDILGRSTAEIPARVQAWAQLFS
3NL6 Chain:A ((9-243))DYSLYLVT-SGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGP--VDYIGVGTLFPTLT----KKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLD--AAKSTKILRGLI-


General information:
TITO was launched using:
RESULT:

Template: 3NL6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 942 -18960 -20.13 -98.24
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -20.13
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_3NL6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NL6-query.scw
PDB file : Tito_Scwrl_3NL6.pdb: